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Changelog

Unreleased

  • RF: allow for any "recording" file to be listed in _scans.tsv not just "neural recording" #1368 (yarikoptic)
  • [FIX] make references to Neuromag/Elekta/MEGIN consistent #1359 (sappelhoff)
  • [DOC] link to steering group section on bids website #1358 (Remi-Gau)
  • [ENH] Add reference for ASL BEP #1357 (Remi-Gau)
  • [FIX] remove redundant entity definitions in behavioral page #1356 (Remi-Gau)
  • [FIX] add missing processing entity for MEG physio files and render physio filename templates for fNIRS #1355 (Remi-Gau)
  • [ENH] Recommend gzip header fields be set to empty values #1349 (kousu)
  • [FIX] clarify TriggerChannelCount and TRIG type #1342 (sappelhoff)
  • [ENH] Add qMRI fieldmap filename templates #1336 (Remi-Gau)
  • [ENH] Add ParallelReductionFactorOutOfPlane to MRI metadata #1221 (lukeje)
  • [ENH][SCHEMA] Adding an OPTIONAL _task-\

v1.8.0 (2022-10-29)

  • [FIX] Drop the functional and f for NIRS #1325 (rob-luke)
  • [FIX][SCHEMA] Add conditionals for PET ReconMethod* and ReconFilter #1299 (bendhouseart)
  • [ENH] use schema to mention which "top directories" are allowed #1289 (Remi-Gau)
  • [ENH] Add glossary links to all tables #1268 (tsalo)
  • [ENH] Remove redundant entity definitions on MRI page #1265 (tsalo)
  • [ENH] Standardize and organize entity descriptions #1264 (tsalo)
  • [ENH] Add filename template legend #1259 (Remi-Gau)
  • [MISC] Reorder appendices #1256 (tsalo)
  • [MISC] Clarify: FieldMap PE technique --> no SPM #1253 (CPernet)
  • [MISC] Adding qMRI BIDS article reference (BEP001) #1251 (agahkarakuzu)
  • [ENH] Link to filename element definitions in filename templates #1228 (tsalo)
  • [MISC] Remove label format and inheritance principle redundancies in fMRI section #1197 (Remi-Gau)
  • [ENH] add task metadata to PET #1196 (Remi-Gau)
  • [FIX] clarify which file to list in scans.tsv for file formats with multiple files #1178 (sappelhoff)
  • [FIX] add recommendation to fully omit non-compulsory data that is n/a #1171 (sappelhoff)
  • [FIX] Discourage use of "sample" in events if sampling frequency is ambiguous, add guidelines for precision #1140 (sappelhoff)
  • [FIX] Clarify MEG empty-room recommendations #1125 (robertoostenveld)
  • [FIX] clarify no blank and duplicated headers in TSV #1116 (sappelhoff)
  • [ENH] Added the specification for using HED libraries in BIDS #1106 (VisLab)
  • [ENH] Microscopy: NGFF format support #1104 (TheChymera)
  • [ENH] Add Microscopy-BIDS citation #1102 (mariehbourget)
  • [FIX] MEG link typo #1100 (xi)
  • [FIX] IntendedFor in (i)EEG is dataset relative #1093 (sappelhoff)
  • [MISC] make dataset_description.Authors RECOMMENDED #1092 (sappelhoff)
  • [ENH] adding optional _rec-label to DWI #1090 (dorahermes)
  • [ENH] State of the schema sprint #1075 (effigies)
  • [MISC] Preface each macro call with comment #1052 (Remi-Gau)
  • [ENH] allow for .png and .tif in eeg/ieeg/meg as allowed for micr #1049 (yarikoptic)
  • [FIX] typo in "rawdata" example #1045 (sappelhoff)
  • [MISC] consistently use "directory" instead of "folder" as a term #1044 (sappelhoff)
  • [MISC] Update CODEOWNERS #1040 (erdalkaraca)
  • [ENH] Allow README file extensions. #1033 (mateuszpawlik)
  • [MISC] Rewrite and update html build instructions #1032 (sappelhoff)
  • [FIX] Clarify that BIDS standard template data is to be in scanner coordinates (MEG, iEEG, EEG) #1031 (alexrockhill)
  • [FIX] Add coordsystem-specific definition of DigitizedHeadPoints #1023 (tsalo)
  • [FIX] PET Spec; added known DICOM tags, fixed tag error, updated citation, clarified scale factor. #1021 (bendhouseart)
  • [MISC] clarify copyright for logo #1019 (sappelhoff)
  • [FIX] Change recording entity to REQUIRED for pet/blood modality #1005 (ghisvail)
  • [ENH] Microscopy: Add IntendedFor metadata field to photo files #1000 (mariehbourget)
  • [ENH] Introduce the atlas entity for derivatives data #997 (sebastientourbier)
  • [ENH] Clearly define "entity" in common principles #947 (Lestropie)
  • [ENH] Add BIDS URIs and deprecate relative paths, RawSources and (possibly unused) BasedOn #918 (effigies)
  • [ENH] BEP030: Functional Near-Infrared Spectroscopy #802 (rob-luke)
  • [FIX] Clarify run entity to accommodate multiple imaging modalities #760 (yarikoptic)

v1.7.0 (2022-02-15)

  • [FIX] Use wikipedia for TIFF URL, adobe's page is 404ing now #1007 (yarikoptic)
  • [FIX] update highlighting of examples, JSON keys and values, and TSV headers or values in the schema #998 (Remi-Gau)
  • [MISC] minor wording and consistency improvements for channels.tsv in EEG, MEG, iEEG #993 (sappelhoff)
  • [FIX] typo: extra sentence in anat section #991 (Remi-Gau)
  • [FIX] Optionally support echo entity for VFA suffix #989 (TheChymera)
  • [FIX] update definition acq_time for sessions.tsv #986 (Remi-Gau)
  • [FIX] add microscopy to modalities in schema #984 (Remi-Gau)
  • [MISC] update steering group composition #976 (Remi-Gau)
  • [MISC] customize footer on html spec #975 (sappelhoff)
  • [FIX] Update HED appendix to comply with current HED version #970 (VisLab)
  • [ENH] Update B0Field metadata to accommodate single-blip fieldmaps #968 (effigies)
  • [FIX] Reword front page #958 (arokem)
  • [MISC] Update links to starter kit website #957 (effigies)
  • [FIX] Entity table: Clarify meaning of empty cells #955 (Lestropie)
  • [MISC] Add Eric Earl as a Maintainer #953 (ericearl)
  • [FIX] Spelling errors in appendices #951 (Lestropie)
  • [FIX] Broken hyperlink in entity list file #949 (Lestropie)
  • [FIX] Rewrite inheritance principle #946 (Lestropie)
  • [FIX] Typo: ECG_headshape #942 (Moo-Marc)
  • [FIX] description: dwi is specialized T2 weighting, not T2* #939 (sappelhoff)
  • [FIX] relax unrealistically strict requirements with ieeg channels.tsv 'name' column #938 (sappelhoff)
  • [FIX] Add links from derivatives section to entity list #936 (sappelhoff)
  • [FIX] Remove repeated words #934 (DimitriPapadopoulos)
  • [FIX] Clarify that EDF/BDF files MUST have lower case extensions in BIDS #927 (adam2392)
  • [ENH] Generate glossary page from schema #923 (tsalo)
  • [ENH] Render valid value restrictions in tables based on object definitions in schema #921 (tsalo)
  • [ENH] add hemi entity to schema #917 (Remi-Gau)
  • [ENH] update and reformat table for template in coordinate system page #903 (Remi-Gau)
  • [ENH] add details for content of \*\_beh.json #902 (Remi-Gau)
  • [FIX] small typo in json example #897 (Remi-Gau)
  • [INFRA] Document *.webm video files as binary #895 (DimitriPapadopoulos)
  • [SCHEMA] Reorganize schema code into a package #892 (tsalo)
  • [FIX] Clarify shifting dates RECOMMENDED, add example EDF #891 (sappelhoff)
  • [INFRA] fix draft rendering css on mobile or when browser window is narrow #889 (sappelhoff)
  • [MISC] Add an animated BIDS logo #886 (adswa)
  • [SCHEMA] Consolidate schema files by term type #883 (tsalo)
  • [ENH] BEP031: Microscopy #881 (mariehbourget)
  • [INFRA] jQuery 3.4.1 → 3.6.0 #875 (DimitriPapadopoulos)
  • [INFRA] Add "codespell" tool to CI checks to catch typos sooner #873 (DimitriPapadopoulos)
  • [INFRA] Several style fixes (Flake8) for Python code in the repo #872 (DimitriPapadopoulos)
  • [MISC] add Anthony as maintainer #868 (Remi-Gau)
  • [MISC] add "forward slash" requirement for paths to common principles #867 (sappelhoff)
  • [ENH] Add "ScanRAS" as an accepted coordinate frame for ieeg #866 (alexrockhill)
  • [INFRA] Add .lgtm.yml file for better usage of LGTM CI tool #865 (DimitriPapadopoulos)
  • [FIX] update physio bids name in longitudinal study page examples #863 (Remi-Gau)
  • [INFRA] Enforce consistent line endings via .gitattributes #861 (DimitriPapadopoulos)
  • [FIX] Clarify case collision intolerance as a file naming principle #858 (yarikoptic)
  • [INFRA] LGTM recommendation: Unused local variable #853 (DimitriPapadopoulos)
  • [INFRA] LGTM warning: Variable defined multiple times #851 (DimitriPapadopoulos)
  • [FIX] Typos found by codespell #848 (DimitriPapadopoulos)
  • [ENH] Add links to example datasets for each modality #845 (Remi-Gau)
  • [INFRA] Add basic documentation on how to use metadata table macros #840 (Remi-Gau)
  • [ENH] make "Institutional department name" available for all datatypes #839 (Remi-Gau)
  • [INFRA] use macro to render examples in a "tree" like fashion #837 (Remi-Gau)
  • [FIX] Add angio suffix to the non-parametric aMRI suffix table #835 (tsalo)
  • [FIX] Remove last hardcoded suffix table #833 (tsalo)
  • [MISC] make explicit that EDF+ (and for EEG: BDF+) are included in iEEG / EEG format requirements #831 (sappelhoff)
  • [SCHEMA] Add TSV column files #827 (tsalo)
  • [ENH] add metadata to PET calibration factor: "DoseCalibrationFactor" #825 (CPernet)
  • [FIX] correct file location of scans.tsv file in example #824 (ghisvail)
  • [MISC] update available datatypes in specification #819 (sappelhoff)
  • [FIX] document required column order MEG, EEG, iEEG, PET, and fix typo iEEG #818 (sappelhoff)
  • [ENH] BEP031 - New columns to participants.tsv file #816 (mariehbourget)
  • [MISC] make table headers bold #815 (Remi-Gau)
  • [FIX] What is a composite instance? Change to measurement for non MRI modalities? #813 (rob-luke)
  • [ENH] BEP031 - New entity: sample and samples.tsv file #812 (mariehbourget)
  • [ENH] Add device and acquisition metadata for physio files #806 (Remi-Gau)
  • [MISC] Move section on sessions.tsv file: longitudinal files -> modality agnostic files #805 (Remi-Gau)
  • [ENH] Make explicit that "task" metadata applies to "beh" modality #804 (Remi-Gau)
  • [MISC] Make MRI-centric language more general in Events #801 (sappelhoff)
  • [ENH] clarify that entities MUST be unique #800 (sappelhoff)
  • [MISC] deprecate DCOffsetCorrection field from ieeg.json: Use SoftwareFilters field instead #799 (sappelhoff)
  • [FIX] Deprecate ScanDate (PET) in favor of AcquisitionTime in scans.tsv files #798 (mnoergaard)
  • [MISC] add IETF standard link for json #797 (sappelhoff)
  • [INFRA] In PDF, color every other row in table in light gray fill #794 (sappelhoff)
  • [MISC] add link to guide on how to write a good README #793 (sappelhoff)
  • [SCHEMA] Apply schema rules to entity values #792 (tsalo)
  • [INFRA] fix md ci and update ci badges #791 (sappelhoff)
  • [SCHEMA] Use macro for filename templates in file collections appendix #787 (tsalo)
  • [FIX] consistently refer to DICOM Tags throughout the specification #786 (Hboni)
  • [FIX] Amend note about *b*-vecs on DWI specs #782 (oesteban)
  • [INFRA] add CI to find trailing whitespace #780 (sappelhoff)
  • [MISC] Add info on HED key to common principles #777 (sappelhoff)
  • [ENH] add EEGLAB as valid coordinate system for EEG #775 (sappelhoff)
  • [SCHEMA] Add metadata term files #774 (tsalo)
  • [SCHEMA] Add suffix term files #772 (tsalo)
  • [ENH] Allow encoding the fieldmapping intent of the protocol #622 (oesteban)
  • [FIX] Correct iEEG example that contained double suffixes #463 (yarikoptic)
  • [ENH] introduce GeneratedBy to "core" BIDS #440 (yarikoptic)

v1.6.0 (2021-04-22)

  • [FIX] Typos discovered by codespell #784 (yarikoptic)
  • [FIX] Rename "Unit" metadata to "Units" for consistency with existing fields #773 (effigies)
  • [FIX] typo in pet: institution -> institutional #771 (sappelhoff)
  • [INFRA] install git in linkchecker job #767 (sappelhoff)
  • [INFRA] Fix CircleCI workflows #764 (sappelhoff)
  • [INFRA] do not run remark on auto CHANGES #755 (sappelhoff)
  • [FIX] Mix up (typo) between ficiduals and landmarks in EEG spec #754 (rob-luke)
  • [INFRA] updating remark, CIs, contributor docs #745 (sappelhoff)
  • [FIX] schema for i/eeg coordsys+elecs: sub-ses-acq-space are allowed entities #743 (sappelhoff)
  • [MISC] move schema documentation into the schema directory #740 (Remi-Gau)
  • [MISC] standardize string examples format in tables #739 (Remi-Gau)
  • [MISC] Clarify participant_id in participants.tsv file if it exists #738 (adam2392)
  • [FIX] split MEG files should be listed separately in scans.tsv #735 (eort)
  • [FIX] 1) Clarify appropriate labels for space entity, 2) Clarify channels+electrodes do not have to match #734 (sappelhoff)
  • [MISC] refactor stimuli mentioning sections in the events page #697 (Remi-Gau)
  • [ENH] Bep 009: Positron Emission Tomography #633 (melanieganz)

v1.5.0 (2021-02-23)

  • [MISC] Updated TotalAcquiredVolumes into TotalAcquiredPairs #742 (effigies)
  • [SCHEMA] Update qMRI fieldmap schema #728 (effigies)
  • [FIX] Add deprecated anatomical MRI suffixes back into schema #725 (tsalo)
  • [FIX] Correct schema irregularities for func datatype #724 (tsalo)
  • [FIX] Make flip optional for MP2RAGE #722 (tsalo)
  • [FIX] Correct entity names in YAML files #720 (tsalo)
  • [ENH] Clarify run indexing information for MRI acquisitions #719 (effigies)
  • [ENH] Harmonize CoordinateSystem details for MRI, MEG, EEG, iEEG #717 (sappelhoff)
  • [SCHEMA] Update entity YAML keys #714 (effigies)
  • [MISC] Added full names for some contributors in .mailmap file #705 (yarikoptic)
  • [INFRA] Migrate md and yml checks from travis to GH actions #693 (sappelhoff)
  • [INFRA] Move part entity to before recording entity #692 (tsalo)
  • [ENH] BEP001 - qMRI maps and some additional metadata #690 (agahkarakuzu)
  • [ENH] BEP001 - Entity-linked file collections #688 (effigies)
  • [ENH] BEP001 - New entities: inv & mt #681 (agahkarakuzu)
  • [MISC] add contributing guidelines to add figures in the specs #679 (Remi-Gau)
  • [MISC] use RFC 2119 language in legend of the "volume timing" table #678 (Remi-Gau)
  • [FIX] Add OPTIONAL acq entity to channels.tsv, events.tsv to match electrophysiological acquisitions #677 (sappelhoff)
  • [MISC] Update all links to use HTTPS whenever possible. #676 (gllmflndn)
  • [INFRA] Relax line length limit for linting YAML files #673 (effigies)
  • [ENH] BEP001 - New entity: flip #672 (agahkarakuzu)
  • [ENH] BEP001 - RepetitionTimeExcitation and RepetitionTimePreparation #671 (agahkarakuzu)
  • [ENH] Bep 005: Arterial Spin Labeling #669 (sappelhoff)
  • [FIX] Added white space after table #660 (robertoostenveld)
  • [MISC] add remi as maintainer #657 (Remi-Gau)
  • [MISC] update Contributing with info on how to respond to reviews #655 (Remi-Gau)
  • [FIX] add paragraph on MEG specific "markers" suffix in MEG spec #653 (sappelhoff)
  • [FIX] Rewrite the MRI/fieldmaps subsection for consistency with the rest of specs #651 (oesteban)
  • [FIX] Fixing template string on electrodes for eeg and ieeg. #650 (adam2392)
  • [ENH] Update genetics-BIDS citation #646 (effigies)
  • [SCHEMA] Add derivatives entities to the schema #645 (tsalo)
  • [MISC] add brief note that TSV example in the spec may currently use either tab or space characters #643 (yarikoptic)
  • [ENH] Add "multipart DWI" acquisitions and refactor DWI specifications #624 (oesteban)
  • [SCHEMA] Render schema elements in text #610 (tsalo)
  • [ENH] Add part entity for complex-valued data #424 (tsalo)

v1.4.1 (2020-10-13)

  • [INFRA] minor robustness enhancements to pdf build shell script #642 (yarikoptic)
  • [FIX] consistent CoordinateSystem fields for ephys #641 (sappelhoff)
  • [INFRA] set up github action to detect latin phrases #636 (Remi-Gau)
  • [ENH] Add a definition for "deprecation" #634 (sappelhoff)
  • [MISC] consolidate BIDS citations in introduction #630 (sappelhoff)
  • [FIX] URI "definition" and recommendation #629 (Remi-Gau)
  • [FIX] change remaining latin expressions (etc and i.e.) #628 (Remi-Gau)
  • [FIX] replace "e.g.," by "for example" #626 (Remi-Gau)
  • [FIX] arrays of 3D coordinates MUST supply numeric values in x, y, z order #623 (sappelhoff)
  • [FIX] Accidentally swapped Neuromag/Elekta/MEGIN cross-talk & fine-calibration filename extensions #621 (hoechenberger)
  • [FIX] improve HED documentation #619 (VisLab)
  • [INFRA] Move MRI section headings up a level #618 (tsalo)
  • [INFRA] SCHEMA: Declare entities by concept names, add entity field for filename components #616 (effigies)
  • [FIX] Change wrong text references from *CoordinateSystemUnits to *CoordinateUnits #614 (sappelhoff)
  • [ENH] Describe arbitrary units in Common Principles #606 (tsalo)
  • [FIX] Clarify data types and requirement levels for all JSON files #605 (sappelhoff)
  • [INFRA] downgrade github-changelog-generator to 1.14.3 due to issue with 1.15.2 #600 (sappelhoff)
  • [FIX] tighter rules for sharing MEG cross-talk and fine-calibration .fif files #598 (sappelhoff)
  • [MISC] Add tsalo as a BIDS maintainer #597 (tsalo)
  • [FIX] clarify definition of events in common principles #595 (sappelhoff)
  • [INFRA] use --release-branch option in github-changelog-generator #594 (sappelhoff)
  • [ENH] Define "modality" and clarify "data type" #592 (effigies)
  • [FIX] Adjust index definition to be nonnegative integer #590 (nicholst)
  • [MISC] fix links, make json object links consistent, fix pandoc rendering #587 (sappelhoff)
  • [FIX] Fix link in Common principles #583 (tsalo)
  • [ENH] Specify how to share cross-talk and fine-calibration for Neuromag/Elekta/MEGIN data #581 (sappelhoff)
  • [ENH] Specify echo and run indices are nonnegative integers in schema #578 (tsalo)
  • [ENH] add optional presentation software name, version, OS, and code to events.json #573 (Remi-Gau)
  • [ENH] added PPG as an accepted channel type for EEG, MEG and iEEG #570 (robertoostenveld)
  • [INFRA] Move entity definitions to a separate page #568 (tsalo)
  • [INFRA] enable pandoc emojis for the pdf build #562 (sappelhoff)
  • [INFRA] Auto adjust table fences before PDF conversion #560 (sebastientourbier)
  • [ENH] Support run and acq entities in behavior-only data #556 (tsalo)
  • [FIX] Clarify requirement levels for TSV metadata fields #555 (sappelhoff)
  • [FIX] Reorganize rec, ce entities, _defacemask #550 (emdupre)
  • [FIX] Clarify Upper-casing of Channels.tsv Channel Type #548 (adam2392)
  • [ENH] Extend date time information to include optional UTC syntax, warn about FIF requirements #546 (sappelhoff)
  • [FIX] clarify that \.json is REQUIRED #542 (sappelhoff)
  • [FIX] Replace all non-breaking spaces with vanilla spaces #536 (nicholst)
  • [FIX] Clarify indices are nonnegative integers. #535 (nicholst)
  • [FIX] Clarify use of session entity in filenames #532 (Moo-Marc)
  • [ENH] Add the ability of users to specify an explicit HED.xml schema for validation. #527 (VisLab)
  • [FIX] clarify that scans.json is allowed and recommended #523 (sappelhoff)
  • [INFRA] add copyright holder to license. #521 (sappelhoff)
  • [FIX] clarify XXXCoord* in the coordinate systems appendix #520 (sappelhoff)
  • [ENH] Update beh/ specification to contrast with any neural recordings #515 (effigies)
  • [FIX] restructure and clarify *_physio/*_stim section #513 (sappelhoff)
  • [FIX] clarify file formats in EEG, iEEG #511 (sappelhoff)
  • [FIX] Add links and release dates to pre GH changelog, fix formatting #509 (sappelhoff)
  • [FIX] Clarify that acq\_time in scans.json refers to first data point acquired #506 (tsalo)
  • [INFRA] make circle artifact link a GH action, point to pdf #505 (sappelhoff)
  • [FIX] Typos in DECISION-MAKING file #504 (tsalo)
  • [ENH] Add Commenting on a PR to CONTRIBUTING.md #490 (franklin-feingold)
  • [FIX] clarify MEG empty-room recording naming conventions #480 (sappelhoff)
  • [INFRA] Convert entity table to yaml #475 (tsalo)
  • [FIX] Recommend SI units formatting to adhere to CMIXF-12 #411 (sappelhoff)

v1.4.0 (2020-06-11)

  • [FIX] Clarify language on unsetting a key/value pair #495 (nicholst)
  • [ENH] optionally allow LICENSE file #483 (sappelhoff)
  • [INFRA] linkchecker - ignore github pull and tree URLs #477 (yarikoptic)
  • [ENH] Allow fractional seconds in scans file datetimes #470 (tsalo)
  • [MISC] Maintainers - Scope responsibility #467 (franklin-feingold)
  • [FIX] Align tables in MRI section #465 (sappelhoff)
  • [FIX] Drop \_part- reference from example, introduce \_split- entity #460 (sappelhoff)
  • [FIX] clarify participants tsv+json with examples and recommendations #459 (sappelhoff)
  • [FIX] Remove BESA from list of restricted keywords of EEG coordsystems #457 (sappelhoff)
  • [INFRA] add steps for release protocol (PDF upload) #455 (sappelhoff)
  • [FIX] Add reference to PDF on front page of specification #452 (nicholst)
  • [INFRA] Add conditional for link-checking releases #451 (franklin-feingold)
  • [FIX] unordered list formatting in BEP018 #449 (sappelhoff)
  • [FIX] fix inconsistencies for task label between sections #446 (Remi-Gau)
  • [FIX] update DECISION-MAKING.md document with new governance #441 (sappelhoff)
  • [ENH] BEP 003: Common Derivatives #265 (effigies)
  • [ENH] Add Glossary of terms/abbreviations used in the specification #152 (yarikoptic)

v1.3.0 (2020-04-14)

v1.2.2 (2020-02-12)

v1.2.1 (2019-08-14)

v1.2.0 (2019-03-04)

v1.1.2 (2019-01-10)

1.1.1 (2018-06-06)

  • Improved the MEG landmark coordinates description.
  • Replaced ManufacturersCapModelName in meg.json with CapManufacturer and CapManufacturersModelName.
  • Remove EEGSamplingFrequency and ManufacturersAmplifierModelName from the meg.json.
  • Improved the behavioral data description.

1.1.0 (2018-04-19)

1.0.2 (2017-07-18)

1.0.1 (2017-03-13)

1.0.1-rc1

  • Added T1 Rho maps: 4.1 Anatomy imaging data.
  • Added support for phenotypic information split into multiple files: 3.2 Participant key file.
  • Added recommendations for multi site datasets.
  • Added SoftwareVersions.
  • Added run-<run_index> to the phase encoding maps. Improved the description.
  • Added InversionTime metadata key.
  • Clarification on the source vs raw language.
  • Added trial_type column to the event files.
  • Added missing sub-<participant_label> in behavioral data filenames.
  • Added ability to store stimuli files.
  • Clarified the language describing allowed subject labels.
  • Added quantitative proton density maps.

1.0.0 (2016-06-23)

  • Added ability to specify fieldmaps acquired with multiple parameter sets.
  • Added ability to have multiple runs of the same fieldmap.
  • Added FLASH anatomical images.

1.0.0-rc4

  • Replaced links to neurolex with explicit DICOM Tags.
  • Added sourcedata.
  • Added data dictionaries.
  • Be more explicit about contents of JSON files for structural (anatomical) scans.

1.0.0-rc3

  • Renamed PhaseEncodingDirection values from "x", "y", "z" to "i", "j", "k" to avoid confusion with FSL parameters.
  • Renamed SliceEncodingDirection values from "x", "y", "z" to "i", "j", "k".

1.0.0-rc2

  • Removed the requirement that TSV files cannot include more than two consecutive spaces.
  • Refactor of the definitions sections (copied from the manuscript).
  • Make support for uncompressed .nii files more explicit.
  • Added BIDSVersion to dataset.json.
  • Remove the statement that SliceEncodingDirection is necessary for slice time correction.
  • Change dicom converter recommendation from dcmstack to dcm2nii and dicm2nii following interactions with the community (see https://github.com/moloney/dcmstack/issues/39 and https://github.com/neurolabusc/dcm2niix/issues/4).
  • Added section on behavioral experiments with no accompanying MRI acquisition.
  • Add _magnitude.nii[.gz] image for GE type fieldmaps.
  • Replaced EchoTimeDifference with EchoTime1 and EchoTime2 (SPM toolbox requires this input).
  • Added support for single band reference image for DWI.
  • Added DatasetDOI field in the dataset description.
  • Added description of more metadata fields relevant to DWI fieldmap correction.
  • PhaseEncodingDirection is now expressed in "x", "y" etc. instead of "PA" "RL" for DWI scans (so it's the same as BOLD scans).
  • Added rec-<label> flag to BOLD files to distinguish between different reconstruction algorithms (analogous to anatomical scans).
  • Added recommendation to use _physio suffix for continuous recordings of motion parameters obtained by the scanner side reconstruction algorithms.

1.0.0-rc1

  • Initial release

* This Change Log was automatically generated by github_changelog_generator