Contributing to and extending the BIDS specification

This page lists some ways that you can get involved with the BIDS community.

Contributing to BIDS

There are many ways to get involved with the BIDS community!

The BIDS Starter Kit

If you're new to the BIDS community and you'd like to learn a bit more, we recommend checking out the BIDS Starter Kit. This has introductory information about the BIDS specification, tools in the BIDS ecosystem, and how you can get involved.

The BIDS Contributor guide

If you'd like to get involved more heavily in helping extend the BIDS specification or develop tools for it, see the BIDS Contributor Guide. It contains more in-depth information for getting involved with the BIDS community.

BIDS Extension Proposals

The BIDS specification can be extended in a backwards compatible way and will evolve over time. These are accomplished with BIDS Extension Proposals (BEPs), which are community-driven processes.

Below is a table of currently-active BEPs. The "Extension label" column provides a direct link to the documentation.

Extension label Title Moderators/ leads Summary Blocking point(s)
BEP001 Structural acquisitions that include multiple contrasts (multi echo, flip angle, inversion time) sequences Gilles de Hollander and Kirstie Whitaker The draft BEP is nearly ready to be submitted as a PR. A few items need to be revised and a final decision made.
BEP002 The BIDS Models Specification Tal Yarkoni Working with the computational models group for consistency. Starting with fMRI then extend to other modalities. An item that is blocking progress is transformed data.
BEP003 Common Derivatives Available Need a leader to help finish push this to completion. An item that is blocking progress is coordinate systems.
BEP004 Susceptibility Weighted Imaging (SWI) Available Looking for a new leader. Searching for a new leader.
BEP005 Arterial Spin Labeling (ASL) Henk-Jan Mutsaerts and Michael Chappell Very close to completion. This includes finalizing the implementation in the validator and drafting the manuscript. None.
BEP009 Positron Emission Tomography (PET) Melanie Ganz Very close to completion. This includes finalizing the standard and writing the paper. None.
BEP011 The structural preprocessing derivatives Andrew Hoopes Have finalized the surface-based and volumetric overlays (and stats), differentiate between discrete and probabilistic segmentation. The next step for this BEP is standardizing the universal look-up table and characterizing surfaces. None.
BEP012 The functional preprocessing derivatives Camille Maumet and Chris Markiewicz None.
BEP013 The resting state fMRI derivatives Steven Giavasis Merged into BEP012 None.
BEP014 The affine transformations and nonlinear field warps Oscar Esteban A new file format (X5) to store spatial transforms is being created, and a draft proposal has been discussed under the scope of this BEP. A software prototype demonstrating X5 is currently under development. In progress.
BEP015 Mapping file Eric Earl, Camille Maumet, and Vasudev Raguram Comments in BEP suggest this could be a tool rather than a BEP. This BEP is looking for thoughts and contributions. Thoughts and contributions.
BEP016 The diffusion weighted imaging derivatives Franco Pestilli and Oscar Esteban Being discussed in a GitHub repository
BEP017 Generic BIDS connectivity data schema Eugene Duff and Paul McCarthy This BEP is searching for a reviewer with fresh eyes that understands the scope of this BEP. None.
BEP018 Genetic information Cyril R Pernet, Clara Moreau, and Thomas Nichols Submitted a pull request for review None.
BEP019 DICOM Metadata Satrajit Ghosh Not active - perhaps this is in the 20% of use cases. Could be a NIDM extension rather than in BIDS. None.
BEP020 Eye Tracking including Gaze Position and Pupil Size(ET) Benjamin Gagl and Dejan Draschkow BEP is progressing and reaching consensus on items. Small issues are blocking completion.
BEP021 Common Electrophysiological Derivatives Mainak Jas, Stefan Appelhoff, Cyril Pernet, Robert Oostenveld, Teon Brooks Work has resumed since merging in EEG and iEEG. Next steps are to distribute a survey to gather what derivatives researchers care about, create example datasets to understand practical issues, and updates to the validator. A few blocking items is what file format may be best suited and annotations.
BEP022 Magnetic Resonance Spectroscopy (MRS) Dickson Wong This is stalled effort, but trying to restart. Restarting the effort.
BEP023 PET Preprocessing derivatives Martin Noergaard, Graham Searle, Melanie Ganz Work is paused until BEP009 manuscript has been submitted/accepted. A blocking item is the need for more contributors, especially from senior PET experts.
BEP024 Computed Tomography scan (CT) Hugo Boniface This effort has stalled and looking for more contributors and experts. None.
BEP025 Medical Population Imaging Data structure (MIDS) Jose Manuel Saborit Torres, Maria de la Iglesia VayĆ” This BEP is working on the automated recognition of the DICOM sequence and writing the manuscript. None.
BEP026 Microelectrode Recordings (MER) Greydon Gilmore Active effort. Looking for thoughts and contributions None.
BEP027 BIDS Execution Chris Markiewicz and Greg Kiar Partial draft seeking community input and fleshing out of some details. Examples and tooling should be available prior to release to demonstrate viability. None.

When an extension reaches maturity it is merged into the main body of the specification. Below is a table of BEPs that have been merged in the main body of the specification.

Extension label Title Moderators/leads
BEP006 Electroencephalograpgy (EEG) Cyril Pernet, Stefan Appelhoff, Robert Oostenveld
BEP007 Hierarchical Event Descriptor (HED) Tags Chris Gorgolewski
BEP008 Magnetoencephalography (MEG) Guiomar Niso
BEP010 intracranial Electroencephalograpgy (iEEG) Chris Holdgraf, Dora Hermes

All of the extension ideas that are not backwards compatible and thus will have to wait for BIDS 2.0 are listed here.